8 jobs found in Bern

The team of Prof. Jessica Bastiaansen is looking for two talented PhD students to develop novel quantitative imaging technology for clinical MRI systems. The candidate will join an exciting interdisciplinary research initiative in active collaboration with Siemens Healthineers (on-site scientists), clinicians from the Department of Interventional and Pediatric Radiology (DIPR), and physicists and engineers from the Translational Imaging Center (TIC) at the SITEM-INSEL. The TIC is an interdisciplinary research environment with state-of-the-art 3T and 7T systems. Clinical translation is furthermore supported by MRI scanner access and established collaborations within the DIPR at the INSEL, one of five Swiss university hospitals. The SITEM-INSEL hosts various research groups, a variety of start-ups, and fosters entrepreneurship. Through collaborations with the AI center (CAIM) and the ARTORG institute, the environment contributes to thriving (bio)medical research activities in the...

We are looking for a talented MRI scientist to join the team of Prof. Jessica Bastiaansen to develop imaging technology for clinical MRI systems. The candidate will join an exciting research initiative in active collaboration with Siemens Healthineers (on-site scientists), clinicians from the Department of Interventional and Pediatric Radiology (DIPR), and physicists and engineers from the Translational Imaging Center (TIC) at the SITEM-INSEL. The TIC is an interdisciplinary research environment with state-of-the-art 3T and 7T MRI scanners. Clinical translation is furthermore supported by MRI scanner access and established collaborations within the Department of Radiology (DIPR) at the INSEL, one of five Swiss university hospitals. The SITEM-INSEL hosts various research groups, a variety of startups, and fosters entrepreneurship. Through collaborations with the AI center (CAIM) and the ARTORG institute, the environment contributes to thriving (bio)medical research activities in the...

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Colorectal cancer is a heterogeneous disease with a tumor microenvironment rich in different cell types, densities and frequencies. Tumor budding at the advancing edge of the cancer has been described as an important prognostic and potentially predictive factor, with features of Epithelial Mesenchymal Transition (EMT), but the characterization of the environment in which it persists has yet to be elucidated. In this project, we investigate the tumor microenvironment of colorectal cancers, using novel microfluidic fluorescence multiplexing technology. In a partnership with Lunaphore technologies (www.lunaphore.ch), we will establish panels of protein markers to characterize this environment and establish analysis pipelines for performing cell phenotyping, spatial analysis and other cellular neighborhood explorations. We aim to combine morphology and protein analysis to achieve a more in-depth phenotypic characterization and translate these into novel insights of colorectal cancer...

Applicants are invited for a PhD fellowship at the Medical Image Analysis group of the ARTORG Center for Biomedical engineering Research, University of Bern, as part of a multidisciplinary project in collaboration with the Radiation Oncology department of the University Hospital Bern, Inselspital, and the department of Radiation Oncology of the University Hospital Zürich. Your job:In this project your role is to design, develop and evaluate a new generation of Deep Learning technologies aiming at enhancing the quality assurance process of radiation therapy planning. Data will be provided through three large multicenter clinical trials conducted by the European Organization of Research and Treatment of Cancer (EORTC) Brain Tumor Group (BTG) as well as an imaging dataset from the University Hospital of Zurich. In this project you will be working actively with radiation oncology experts as well as with biomedical engineers and other computer scientists to develop and clinically...

The Interfaculty Bioinformatics Unit of the University of Bern is a competence center for "Bioinformatics and Computational Biology" and provides – besides own research projects - expertise to help researchers with the planning, implementation and analysis of next generation sequencing (NGS) experiments. We collaborate on a wide range of projects in the life sciences and biomedical sciences. We run a High Performance Compute cluster used by researchers of UniBe and UniFr and also direct the "MSc in Bioinformatics and Computational Biology". We are in search of a Bioinformatician/Computational Biologist 100%. TasksYour responsibilities will include Primary processing of data from NGS experiments, for example: RNA-seq, whole genome or whole exome resequencing, metagenomics, de novo assembly Improvement and implementation of existing and new analytical pipelines (RNA-seq, scRNA-seq, metagenomics, etc.) Collaborate with researchers on all data analysis steps, in...

Applicants are invited for a PhD fellowship at the Medical Image Analysis group of the ARTORG Center for Biomedical engineering Research, University of Bern, as part of a multidisciplinary project in collaboration with the Radiation Oncology department of the University Hospital Bern, Inselspital, and the department of Radiation Oncology of the University Hospital Zürich. Your job:In this project your role is to design, develop and evaluate a new generation of Deep Learning technologies aiming at enhancing the quality assurance process of radiation therapy planning. Data will be provided through three large multicenter clinical trials conducted by the European Organization of Research and Treatment of Cancer (EORTC) Brain Tumor Group (BTG) as well as an imaging dataset from the University Hospital of Zurich. In this project you will be working actively with radiation oncology experts as well as with biomedical engineers and other computer scientists to develop and clinically...

The Artificial Intelligence in Medical Imaging (AIMI) lab at the University of Bern's ARTORG Center for Biomedical Engineering Research invites applications from research and software engineers with a strong background in computer science and programming to work on innovative tools in the domains for healthcare. We are looking for enthusiastic candidates with excellent technical skills to join our research group. We require outstanding in-depth technical skills in programming. Candidates are expected to have the following experience: 3+ years of experience developing web front ends in HTML / CSS / JavaScript Experience in Python back-end programming Experience with SQL databases and React is a plus Experience with Linux System Administration and Docker Interest in learning/applying new machine learning or deep learning methods BS/MS in Computer Science or a related technical field Good English language skills The appointee will pursue the design and development...